Task 96701383

Name ebola_RdRp_v1_sample_00758800_r1_s-18.0_0
Workunit 67433781
Created 23 Oct 2025, 10:07:15 UTC
Sent 24 Oct 2025, 4:34:04 UTC
Report deadline 28 Oct 2025, 4:34:04 UTC
Received 25 Oct 2025, 2:00:28 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 7 hours 22 min 25 sec
CPU time 7 hours 21 min 52 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.55 MB
Peak swap size 247.48 MB
Peak disk usage 20.62 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:34:09 (28288): wrapper (7.17.26016): starting
23:34:09 (28288): wrapper (7.17.26016): starting
23:34:09 (28288): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f7677e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783c46645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x783c4669eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x783c4664527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x783c466288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x783c466297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x783c466a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x783c466ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x783c466addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f7677e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f7677e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783c46645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x783c466ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x783c466f9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x783c4670ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5f7677e51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f7677e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x783c4662a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x783c4662a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f7677e1aa3a]

Exiting...
20:07:40 (2633): wrapper (7.17.26016): starting
20:07:40 (2633): wrapper (7.17.26016): starting
20:07:40 (2633): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10642): wrapper (7.17.26016): starting
21:00:02 (10642): wrapper (7.17.26016): starting
21:00:02 (10642): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:10 (10642): cmdock exited; CPU time 7.188746
21:00:10 (10642): called boinc_finish(0)

</stderr_txt>
]]>


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