Task 96702207

Name ebola_RdRp_v1_sample_00780400_r2_s-18.0_0
Workunit 67434646
Created 23 Oct 2025, 10:07:58 UTC
Sent 24 Oct 2025, 5:06:12 UTC
Report deadline 28 Oct 2025, 5:06:12 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 6 hours 51 min 20 sec
CPU time 6 hours 50 min 31 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.74 MB
Peak swap size 248.68 MB
Peak disk usage 20.70 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:06:18 (33032): wrapper (7.17.26016): starting
00:06:18 (33032): wrapper (7.17.26016): starting
00:06:18 (33032): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/37/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62df57a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c171b245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c171b29eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c171b24527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c171b2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c171b2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c171b2a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c171b2ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c171b2addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62df57a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62df57a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c171b245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c171b2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c171b2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c171b32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62df57a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62df57a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c171b22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c171b22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62df57a1aa3a]

Exiting...
20:07:40 (2643): wrapper (7.17.26016): starting
20:07:40 (2643): wrapper (7.17.26016): starting
20:07:40 (2643): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/37/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10654): wrapper (7.17.26016): starting
21:00:02 (10654): wrapper (7.17.26016): starting
21:00:02 (10654): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/37/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:11 (10654): cmdock exited; CPU time 8.449354
21:00:11 (10654): called boinc_finish(0)

</stderr_txt>
]]>


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