Task 96702506

Name ebola_RdRp_v1_sample_00787900_r3_s-18.0_0
Workunit 67434947
Created 23 Oct 2025, 10:08:11 UTC
Sent 24 Oct 2025, 5:16:33 UTC
Report deadline 28 Oct 2025, 5:16:33 UTC
Received 24 Oct 2025, 17:09:57 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 6 hours 20 min 11 sec
CPU time 6 hours 14 min 32 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.18 MB
Peak swap size 247.34 MB
Peak disk usage 20.80 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:42:29 (647017): wrapper (7.17.26016): starting
02:42:29 (647017): wrapper (7.17.26016): starting
02:42:29 (647017): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62aac7c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72bc03445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72bc0349eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72bc0344527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72bc034288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72bc034297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72bc034a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72bc034ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72bc034addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62aac7c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62aac7c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72bc03445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72bc034ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72bc034f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72bc0352975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62aac7c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62aac7c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72bc0342a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72bc0342a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62aac7c1aa3a]

Exiting...
09:45:03 (698456): wrapper (7.17.26016): starting
09:45:03 (698456): wrapper (7.17.26016): starting
09:45:03 (698456): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:05:32 (2433): wrapper (7.17.26016): starting
12:05:32 (2433): wrapper (7.17.26016): starting
12:05:32 (2433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:08:21 (2404): wrapper (7.17.26016): starting
12:08:21 (2404): wrapper (7.17.26016): starting
12:08:21 (2404): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:08:26 (2404): cmdock exited; CPU time 4.377083
12:08:26 (2404): called boinc_finish(0)

</stderr_txt>
]]>


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