Task 96703897

Name ebola_RdRp_v1_sample_00822300_r4_s-18.0_0
Workunit 67436324
Created 23 Oct 2025, 10:09:21 UTC
Sent 24 Oct 2025, 6:20:15 UTC
Report deadline 28 Oct 2025, 6:20:15 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 5 hours 36 min 48 sec
CPU time 5 hours 36 min 5 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.04 MB
Peak swap size 247.50 MB
Peak disk usage 20.47 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:20:19 (43036): wrapper (7.17.26016): starting
01:20:19 (43036): wrapper (7.17.26016): starting
01:20:19 (43036): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5bfe80c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x706f39445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x706f3949eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x706f3944527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x706f394288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x706f394297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x706f394a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x706f394ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x706f394addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5bfe80c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5bfe80c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x706f39445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x706f394ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x706f394f9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x706f3950ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5bfe80c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5bfe80c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x706f3942a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x706f3942a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5bfe80c1aa3a]

Exiting...
20:07:40 (2648): wrapper (7.17.26016): starting
20:07:40 (2648): wrapper (7.17.26016): starting
20:07:40 (2648): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10659): wrapper (7.17.26016): starting
21:00:02 (10659): wrapper (7.17.26016): starting
21:00:02 (10659): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:11 (10659): cmdock exited; CPU time 7.746386
21:00:11 (10659): called boinc_finish(0)

</stderr_txt>
]]>


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