Task 96704351

Name ebola_RdRp_v1_sample_00833700_r4_s-18.0_0
Workunit 67436780
Created 23 Oct 2025, 10:09:47 UTC
Sent 24 Oct 2025, 6:42:03 UTC
Report deadline 28 Oct 2025, 6:42:03 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 5 hours 4 min 14 sec
CPU time 5 hours 3 min 38 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.30 MB
Peak swap size 247.58 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:54:07 (47125): wrapper (7.17.26016): starting
01:54:07 (47125): wrapper (7.17.26016): starting
01:54:07 (47125): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6328c3c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79dcdae45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79dcdae9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79dcdae4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79dcdae288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79dcdae297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79dcdaea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79dcdaeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79dcdaeaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6328c3c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6328c3c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79dcdae45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79dcdaeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79dcdaef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79dcdaf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6328c3c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6328c3c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79dcdae2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79dcdae2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6328c3c1aa3a]

Exiting...
20:07:40 (2653): wrapper (7.17.26016): starting
20:07:40 (2653): wrapper (7.17.26016): starting
20:07:40 (2653): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10661): wrapper (7.17.26016): starting
21:00:02 (10661): wrapper (7.17.26016): starting
21:00:02 (10661): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:11 (10661): cmdock exited; CPU time 8.449405
21:00:11 (10661): called boinc_finish(0)

</stderr_txt>
]]>


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