Task 96705485

Name ebola_RdRp_v1_sample_00862100_r2_s-18.0_0
Workunit 67437914
Created 23 Oct 2025, 10:10:44 UTC
Sent 24 Oct 2025, 7:18:39 UTC
Report deadline 28 Oct 2025, 7:18:39 UTC
Received 24 Oct 2025, 19:43:53 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 75943
Run time 12 hours 5 min 17 sec
CPU time 12 hours 4 min 34 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 8.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.75 MB
Peak swap size 248.08 MB
Peak disk usage 20.57 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
00:18:42 (51946): wrapper (7.17.26016): starting
00:18:43 (51946): wrapper (7.17.26016): starting
00:18:43 (51946): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57852ea3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76a27c645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x76a27c6add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57852ea5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57852ea7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76a27c645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76a27c6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76a27c6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76a27c72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57852ea51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57852ea1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76a27c62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76a27c62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57852ea1aa3a]

Exiting...
10:05:26 (1787): wrapper (7.17.26016): starting
10:05:26 (1787): wrapper (7.17.26016): starting
10:05:26 (1787): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fb4b803ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b7398845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7b73988add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fb4b805c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fb4b807b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b7398845330]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x5fb4b803aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b7398845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b73988ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b73988f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b739892975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fb4b8051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fb4b801e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b739882a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b739882a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fb4b801aa3a]

Exiting...
10:10:32 (1811): wrapper (7.17.26016): starting
10:10:32 (1811): wrapper (7.17.26016): starting
10:10:32 (1811): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55bc3623ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d20cc445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7d20cc4add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55bc3625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55bc3627b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d20cc445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d20cc4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d20cc4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d20cc52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55bc36251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55bc3621e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d20cc42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d20cc42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55bc3621aa3a]

Exiting...
10:15:31 (1814): wrapper (7.17.26016): starting
10:15:31 (1814): wrapper (7.17.26016): starting
10:15:31 (1814): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64fd77e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b204bc45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7b204bcadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64fd77e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64fd77e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b204bc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b204bcecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b204bcf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b204bd2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64fd77e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64fd77e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b204bc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b204bc2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64fd77e1aa3a]

Exiting...
11:25:52 (1807): wrapper (7.17.26016): starting
11:25:52 (1807): wrapper (7.17.26016): starting
11:25:52 (1807): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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