Task 96705833

Name ebola_RdRp_v1_sample_00870800_r2_s-18.0_0
Workunit 67438262
Created 23 Oct 2025, 10:10:59 UTC
Sent 24 Oct 2025, 7:31:10 UTC
Report deadline 28 Oct 2025, 7:31:10 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 4 hours 26 min 46 sec
CPU time 4 hours 25 min 54 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.03 MB
Peak swap size 248.09 MB
Peak disk usage 20.47 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:31:16 (51682): wrapper (7.17.26016): starting
02:31:16 (51682): wrapper (7.17.26016): starting
02:31:16 (51682): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59db8663ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x785e8a245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x785e8a2add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59db8665c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59db8667b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x785e8a245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x785e8a2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x785e8a2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x785e8a32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59db86651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59db8661e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x785e8a22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x785e8a22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59db8661aa3a]

Exiting...
20:07:40 (2656): wrapper (7.17.26016): starting
20:07:40 (2656): wrapper (7.17.26016): starting
20:07:40 (2656): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10668): wrapper (7.17.26016): starting
21:00:02 (10668): wrapper (7.17.26016): starting
21:00:02 (10668): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:10 (10668): cmdock exited; CPU time 7.592077
21:00:10 (10668): called boinc_finish(0)

</stderr_txt>
]]>


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