Task 96708302

Name ebola_RdRp_v1_sample_00932600_r2_s-18.0_0
Workunit 67440734
Created 23 Oct 2025, 10:13:04 UTC
Sent 24 Oct 2025, 9:07:28 UTC
Report deadline 28 Oct 2025, 9:07:28 UTC
Received 25 Oct 2025, 7:46:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 17 min 1 sec
CPU time 8 hours 15 min 46 sec
Validate state Valid
Credit 495.78
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.81 MB
Peak swap size 247.48 MB
Peak disk usage 20.93 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:29:58 (667411): wrapper (7.17.26016): starting
05:29:58 (667411): wrapper (7.17.26016): starting
05:29:58 (667411): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e883ea3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76166f645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76166f69eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76166f64527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76166f6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76166f6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76166f6a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76166f6ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76166f6addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e883ea5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e883ea7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76166f645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76166f6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76166f6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76166f72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e883ea51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e883ea1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76166f62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76166f62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e883ea1aa3a]

Exiting...
09:45:03 (698493): wrapper (7.17.26016): starting
09:45:03 (698493): wrapper (7.17.26016): starting
09:45:03 (698493): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:09:46 (2653): wrapper (7.17.26016): starting
13:09:46 (2653): wrapper (7.17.26016): starting
13:09:46 (2653): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:26:22 (64045): wrapper (7.17.26016): starting
21:26:22 (64045): wrapper (7.17.26016): starting
21:26:22 (64045): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:45:15 (64045): cmdock exited; CPU time 10362.485696
01:45:15 (64045): called boinc_finish(0)

</stderr_txt>
]]>


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