Task 96708727

Name ebola_RdRp_v1_sample_00943200_r1_s-18.0_0
Workunit 67441157
Created 23 Oct 2025, 10:13:26 UTC
Sent 24 Oct 2025, 9:23:41 UTC
Report deadline 28 Oct 2025, 9:23:41 UTC
Received 25 Oct 2025, 9:29:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 9 min 20 sec
CPU time 8 hours 8 min 47 sec
Validate state Valid
Credit 479.61
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.41 MB
Peak swap size 247.66 MB
Peak disk usage 20.67 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:52:33 (677088): wrapper (7.17.26016): starting
06:52:33 (677088): wrapper (7.17.26016): starting
06:52:33 (677088): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (22 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b5657c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75f2fa445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75f2fa49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75f2fa44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75f2fa4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75f2fa4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75f2fa4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75f2fa4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75f2fa4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b5657c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b5657c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75f2fa445330]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x5b5657c3aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75f2fa445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75f2fa4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75f2fa4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75f2fa52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b5657c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b5657c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75f2fa42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75f2fa42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b5657c1aa3a]

Exiting...
09:45:03 (698498): wrapper (7.17.26016): starting
09:45:03 (698498): wrapper (7.17.26016): starting
09:45:03 (698498): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:09:47 (2657): wrapper (7.17.26016): starting
13:09:47 (2657): wrapper (7.17.26016): starting
13:09:47 (2657): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:36:16 (65225): wrapper (7.17.26016): starting
21:36:16 (65225): wrapper (7.17.26016): starting
21:36:16 (65225): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:29:14 (65225): cmdock exited; CPU time 14870.176062
03:29:14 (65225): called boinc_finish(0)

</stderr_txt>
]]>


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