Task 96709187

Name ebola_RdRp_v1_sample_00954700_r1_s-18.0_0
Workunit 67441617
Created 23 Oct 2025, 10:13:52 UTC
Sent 24 Oct 2025, 9:38:40 UTC
Report deadline 28 Oct 2025, 9:38:40 UTC
Received 24 Oct 2025, 19:43:53 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 75943
Run time 9 hours 41 min 6 sec
CPU time 9 hours 40 min 29 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 8.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.74 MB
Peak swap size 246.77 MB
Peak disk usage 20.42 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
02:38:45 (53523): wrapper (7.17.26016): starting
02:38:46 (53523): wrapper (7.17.26016): starting
02:38:46 (53523): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f494063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7dfcdda45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7dfcddaadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f494065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f494067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7dfcdda45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7dfcddaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7dfcddaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7dfcddb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f4940651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f494061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7dfcdda2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7dfcdda2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f494061aa3a]

Exiting...
10:05:26 (1789): wrapper (7.17.26016): starting
10:05:26 (1789): wrapper (7.17.26016): starting
10:05:26 (1789): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5df14063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e92c6c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7e92c6cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5df14065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5df14067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e92c6c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7e92c6cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7e92c6cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7e92c6d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5df140651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5df14061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7e92c6c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7e92c6c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5df14061aa3a]

Exiting...
10:10:32 (1815): wrapper (7.17.26016): starting
10:10:32 (1815): wrapper (7.17.26016): starting
10:10:32 (1815): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59412443ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73c042c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x73c042cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59412445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59412447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73c042c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73c042cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73c042cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73c042d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x594124451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59412441e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73c042c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73c042c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59412441aa3a]

Exiting...
10:15:31 (1818): wrapper (7.17.26016): starting
10:15:31 (1818): wrapper (7.17.26016): starting
10:15:31 (1818): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62514b83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7753c7e45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7753c7eadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62514b85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62514b87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7753c7e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7753c7eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7753c7ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7753c7f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62514b851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62514b81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7753c7e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7753c7e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62514b81aa3a]

Exiting...
11:25:52 (1810): wrapper (7.17.26016): starting
11:25:52 (1810): wrapper (7.17.26016): starting
11:25:52 (1810): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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