Task 96709201

Name ebola_RdRp_v1_sample_00955000_r3_s-18.0_0
Workunit 67441631
Created 23 Oct 2025, 10:13:53 UTC
Sent 24 Oct 2025, 9:37:38 UTC
Report deadline 28 Oct 2025, 9:37:38 UTC
Received 26 Oct 2025, 3:55:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 7 hours 48 min 54 sec
CPU time 7 hours 48 min 20 sec
Validate state Valid
Credit 487.42
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.27 MB
Peak swap size 247.54 MB
Peak disk usage 21.10 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:55:34 (677433): wrapper (7.17.26016): starting
06:55:34 (677433): wrapper (7.17.26016): starting
06:55:34 (677433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6363c0e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7be5a7245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7be5a729eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7be5a724527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7be5a72288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7be5a72297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7be5a72a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7be5a72ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7be5a72addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6363c0e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6363c0e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7be5a7245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7be5a72ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7be5a72f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7be5a732975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6363c0e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6363c0e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7be5a722a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7be5a722a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6363c0e1aa3a]

Exiting...
09:45:03 (698500): wrapper (7.17.26016): starting
09:45:03 (698500): wrapper (7.17.26016): starting
09:45:03 (698500): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:09:48 (2660): wrapper (7.17.26016): starting
13:09:48 (2660): wrapper (7.17.26016): starting
13:09:48 (2660): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:29:16 (109742): wrapper (7.17.26016): starting
03:29:16 (109742): wrapper (7.17.26016): starting
03:29:16 (109742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:13:36 (36597): wrapper (7.17.26016): starting
21:13:36 (36597): wrapper (7.17.26016): starting
21:13:36 (36597): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:54:37 (36597): cmdock exited; CPU time 2459.775683
21:54:37 (36597): called boinc_finish(0)

</stderr_txt>
]]>


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