Task 96709479

Name ebola_RdRp_v1_sample_00961900_r4_s-18.0_0
Workunit 67441908
Created 23 Oct 2025, 10:14:04 UTC
Sent 24 Oct 2025, 9:48:17 UTC
Report deadline 28 Oct 2025, 9:48:17 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 1 hours 52 min 12 sec
CPU time 1 hours 51 min 37 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.75 MB
Peak swap size 246.78 MB
Peak disk usage 20.38 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:05:45 (72482): wrapper (7.17.26016): starting
05:05:45 (72482): wrapper (7.17.26016): starting
05:05:45 (72482): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56f56ec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7a43ede45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7a43ede9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7a43ede4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7a43ede288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7a43ede297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7a43edea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7a43edeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7a43edeaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56f56ec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56f56ec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7a43ede45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7a43edeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7a43edef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7a43edf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56f56ec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56f56ec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7a43ede2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7a43ede2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56f56ec1aa3a]

Exiting...
20:07:40 (2674): wrapper (7.17.26016): starting
20:07:40 (2674): wrapper (7.17.26016): starting
20:07:40 (2674): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10681): wrapper (7.17.26016): starting
21:00:02 (10681): wrapper (7.17.26016): starting
21:00:02 (10681): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:10 (10681): cmdock exited; CPU time 7.736825
21:00:10 (10681): called boinc_finish(0)

</stderr_txt>
]]>


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