Task 96709939

Name ebola_RdRp_v1_sample_00973700_r3_s-18.0_0
Workunit 67442379
Created 23 Oct 2025, 10:14:29 UTC
Sent 24 Oct 2025, 10:13:36 UTC
Report deadline 28 Oct 2025, 10:13:36 UTC
Received 25 Oct 2025, 2:00:55 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 52 min 36 sec
CPU time 52 min 8 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.00 MB
Peak swap size 246.24 MB
Peak disk usage 20.25 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:05:25 (79760): wrapper (7.17.26016): starting
06:05:25 (79760): wrapper (7.17.26016): starting
06:05:25 (79760): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b181023ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71b1e9a45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71b1e9aadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b181025c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b181027b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71b1e9a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71b1e9aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71b1e9af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71b1e9b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b1810251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b181021e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71b1e9a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71b1e9a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b181021aa3a]

Exiting...
20:07:40 (2693): wrapper (7.17.26016): starting
20:07:40 (2693): wrapper (7.17.26016): starting
20:07:40 (2693): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (10696): wrapper (7.17.26016): starting
21:00:02 (10696): wrapper (7.17.26016): starting
21:00:02 (10696): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:11 (10696): cmdock exited; CPU time 8.334116
21:00:11 (10696): called boinc_finish(0)

</stderr_txt>
]]>


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