Task 96709943

Name ebola_RdRp_v1_sample_00973800_r3_s-18.0_0
Workunit 67442383
Created 23 Oct 2025, 10:14:30 UTC
Sent 24 Oct 2025, 10:11:28 UTC
Report deadline 28 Oct 2025, 10:11:28 UTC
Received 25 Oct 2025, 7:35:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 9 hours 22 min 15 sec
CPU time 9 hours 21 min 58 sec
Validate state Valid
Credit 571.17
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.97 MB
Peak swap size 248.08 MB
Peak disk usage 21.25 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:27:37 (164225): wrapper (7.17.26016): starting
05:27:37 (164225): wrapper (7.17.26016): starting
05:27:37 (164225): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d79a7a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x754739045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75473909eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75473904527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7547390288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7547390297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7547390a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7547390ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7547390addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d79a7a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d79a7a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x754739045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7547390ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7547390f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75473912975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d79a7a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d79a7a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75473902a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75473902a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d79a7a1aa3a]

Exiting...
10:00:03 (198660): wrapper (7.17.26016): starting
10:00:03 (198660): wrapper (7.17.26016): starting
10:00:03 (198660): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:13:01 (2639): wrapper (7.17.26016): starting
13:13:01 (2639): wrapper (7.17.26016): starting
13:13:01 (2639): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (62585): wrapper (7.17.26016): starting
21:00:02 (62585): wrapper (7.17.26016): starting
21:00:02 (62585): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:34:27 (62585): cmdock exited; CPU time 16202.130905
01:34:27 (62585): called boinc_finish(0)

</stderr_txt>
]]>


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