Task 96711432

Name ebola_RdRp_v1_sample_01011300_r2_s-18.0_0
Workunit 67443882
Created 23 Oct 2025, 10:15:42 UTC
Sent 24 Oct 2025, 11:02:07 UTC
Report deadline 28 Oct 2025, 11:02:07 UTC
Received 26 Oct 2025, 14:50:24 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 6 sec
CPU time 4 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.21 MB
Peak swap size 42.09 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:09:52 (2742): wrapper (7.17.26016): starting
13:09:52 (2742): wrapper (7.17.26016): starting
13:09:52 (2742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5cb59ce3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d1bad045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d1bad09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d1bad04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d1bad0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d1bad0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d1bad0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d1bad0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d1bad0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5cb59ce5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5cb59ce7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d1bad045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d1bad0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d1bad0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d1bad12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5cb59ce51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5cb59ce1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d1bad02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d1bad02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5cb59ce1aa3a]

Exiting...
09:49:53 (130773): wrapper (7.17.26016): starting
09:49:53 (130773): wrapper (7.17.26016): starting
09:49:53 (130773): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:49:58 (130773): cmdock exited; CPU time 4.220364
09:49:58 (130773): called boinc_finish(0)

</stderr_txt>
]]>


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