Task 96718528

Name ebola_RdRp_v1_sample_01187900_r3_s-18.0_0
Workunit 67450947
Created 23 Oct 2025, 10:21:40 UTC
Sent 24 Oct 2025, 15:14:22 UTC
Report deadline 28 Oct 2025, 15:14:22 UTC
Received 26 Oct 2025, 15:33:35 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 6 sec
CPU time 4 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.75 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.01 MB
Peak swap size 41.63 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:09:55 (2760): wrapper (7.17.26016): starting
13:09:55 (2760): wrapper (7.17.26016): starting
13:09:55 (2760): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ffa95e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71c095645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x71c09569eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x71c09564527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x71c0956288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x71c0956297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x71c0956a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x71c0956ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x71c0956addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ffa95e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ffa95e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71c095645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71c0956ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71c0956f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71c09572975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ffa95e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ffa95e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71c09562a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71c09562a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ffa95e1aa3a]

Exiting...
09:50:14 (130826): wrapper (7.17.26016): starting
09:50:14 (130826): wrapper (7.17.26016): starting
09:50:14 (130826): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:50:19 (130826): cmdock exited; CPU time 4.260226
09:50:19 (130826): called boinc_finish(0)

</stderr_txt>
]]>


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