Task 96720191

Name ebola_RdRp_v1_sample_01229000_r3_s-18.0_0
Workunit 67452591
Created 23 Oct 2025, 10:23:06 UTC
Sent 24 Oct 2025, 16:20:39 UTC
Report deadline 28 Oct 2025, 16:20:39 UTC
Received 25 Oct 2025, 16:39:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 8 hours 28 min 19 sec
CPU time 8 hours 28 min 10 sec
Validate state Valid
Credit 507.95
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.81 MB
Peak swap size 247.77 MB
Peak disk usage 20.87 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:13:04 (2823): wrapper (7.17.26016): starting
13:13:04 (2823): wrapper (7.17.26016): starting
13:13:04 (2823): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x589e14e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79dd88c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79dd88c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79dd88c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79dd88c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79dd88c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79dd88ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79dd88cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79dd88caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x589e14e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x589e14e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79dd88c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79dd88cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79dd88cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x79dd88d0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x589e14e51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x589e14e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79dd88c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79dd88c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x589e14e1aa3a]

Exiting...
21:00:02 (62597): wrapper (7.17.26016): starting
21:00:02 (62597): wrapper (7.17.26016): starting
21:00:02 (62597): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:00:03 (160482): wrapper (7.17.26016): starting
10:00:03 (160482): wrapper (7.17.26016): starting
10:00:03 (160482): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:02:07 (160482): cmdock exited; CPU time 3723.525973
11:02:07 (160482): called boinc_finish(0)

</stderr_txt>
]]>


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