Task 96720256

Name ebola_RdRp_v1_sample_01231800_r3_s-18.0_0
Workunit 67452703
Created 23 Oct 2025, 10:23:10 UTC
Sent 24 Oct 2025, 16:20:39 UTC
Report deadline 28 Oct 2025, 16:20:39 UTC
Received 25 Oct 2025, 10:35:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 9 hours 3 min 20 sec
CPU time 9 hours 3 min 7 sec
Validate state Valid
Credit 542.51
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.49 MB
Peak swap size 247.80 MB
Peak disk usage 21.21 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
12:16:48 (216117): wrapper (7.17.26016): starting
12:16:48 (216117): wrapper (7.17.26016): starting
12:16:48 (216117): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x61c8cf43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d67c4c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d67c4c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d67c4c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d67c4c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d67c4c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d67c4ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d67c4cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d67c4caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x61c8cf45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x61c8cf47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d67c4c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d67c4cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d67c4cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d67c4d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x61c8cf451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x61c8cf41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d67c4c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d67c4c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x61c8cf41aa3a]

Exiting...
13:13:03 (2779): wrapper (7.17.26016): starting
13:13:03 (2779): wrapper (7.17.26016): starting
13:13:03 (2779): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (62594): wrapper (7.17.26016): starting
21:00:02 (62594): wrapper (7.17.26016): starting
21:00:02 (62594): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:49:38 (62594): cmdock exited; CPU time 27209.872348
04:49:38 (62594): called boinc_finish(0)

</stderr_txt>
]]>


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