Task 96720575

Name ebola_RdRp_v1_sample_01238600_r4_s-18.0_0
Workunit 67452976
Created 23 Oct 2025, 10:23:27 UTC
Sent 24 Oct 2025, 16:36:48 UTC
Report deadline 28 Oct 2025, 16:36:48 UTC
Received 25 Oct 2025, 16:39:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 8 hours 37 min 44 sec
CPU time 8 hours 37 min 33 sec
Validate state Valid
Credit 514.99
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.41 MB
Peak swap size 247.96 MB
Peak disk usage 21.25 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:13:05 (2898): wrapper (7.17.26016): starting
13:13:05 (2898): wrapper (7.17.26016): starting
13:13:05 (2898): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6119d163ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7335d9e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7335d9e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7335d9e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7335d9e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7335d9e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7335d9ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7335d9eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7335d9eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6119d165c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6119d167b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7335d9e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7335d9eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7335d9ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7335d9f0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x6119d1651a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6119d161e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7335d9e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7335d9e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6119d161aa3a]

Exiting...
21:05:07 (63355): wrapper (7.17.26016): starting
21:05:07 (63355): wrapper (7.17.26016): starting
21:05:07 (63355): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:00:03 (160483): wrapper (7.17.26016): starting
10:00:03 (160483): wrapper (7.17.26016): starting
10:00:03 (160483): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:38:43 (160483): cmdock exited; CPU time 2319.759073
10:38:43 (160483): called boinc_finish(0)

</stderr_txt>
]]>


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