Task 96720591

Name ebola_RdRp_v1_sample_01239400_r4_s-18.0_0
Workunit 67453008
Created 23 Oct 2025, 10:23:28 UTC
Sent 24 Oct 2025, 16:36:48 UTC
Report deadline 28 Oct 2025, 16:36:48 UTC
Received 25 Oct 2025, 16:39:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 8 hours 32 min 47 sec
CPU time 8 hours 32 min 36 sec
Validate state Valid
Credit 510.39
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.65 MB
Peak swap size 247.42 MB
Peak disk usage 21.18 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:13:06 (2903): wrapper (7.17.26016): starting
13:13:06 (2903): wrapper (7.17.26016): starting
13:13:06 (2903): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x584b9c23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76d660e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76d660e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76d660e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76d660e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76d660e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76d660ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76d660eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76d660eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x584b9c25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x584b9c27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76d660e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76d660eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76d660ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76d660f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x584b9c251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x584b9c21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76d660e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76d660e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x584b9c21aa3a]

Exiting...
22:42:25 (75088): wrapper (7.17.26016): starting
22:42:25 (75088): wrapper (7.17.26016): starting
22:42:25 (75088): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:00:03 (160484): wrapper (7.17.26016): starting
10:00:03 (160484): wrapper (7.17.26016): starting
10:00:03 (160484): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:13:27 (160484): cmdock exited; CPU time 4402.634907
11:13:27 (160484): called boinc_finish(0)

</stderr_txt>
]]>


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