Task 96720772

Name ebola_RdRp_v1_sample_01244800_r1_s-18.0_0
Workunit 67453221
Created 23 Oct 2025, 10:23:39 UTC
Sent 24 Oct 2025, 16:44:11 UTC
Report deadline 28 Oct 2025, 16:44:11 UTC
Received 25 Oct 2025, 17:52:53 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 8 hours 53 min 49 sec
CPU time 8 hours 53 min 37 sec
Validate state Valid
Credit 536.66
Device peak FLOPS 10.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.05 MB
Peak swap size 248.11 MB
Peak disk usage 20.90 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:13:07 (2926): wrapper (7.17.26016): starting
13:13:07 (2926): wrapper (7.17.26016): starting
13:13:07 (2926): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57c12a03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d976a645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d976a69eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d976a64527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d976a6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d976a6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d976a6a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d976a6ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d976a6addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57c12a05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57c12a07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d976a645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d976a6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d976a6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d976a72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57c12a051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57c12a01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d976a62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d976a62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57c12a01aa3a]

Exiting...
22:43:04 (75162): wrapper (7.17.26016): starting
22:43:04 (75162): wrapper (7.17.26016): starting
22:43:04 (75162): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:08:20 (161618): wrapper (7.17.26016): starting
10:08:20 (161618): wrapper (7.17.26016): starting
10:08:20 (161618): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:51:57 (161618): cmdock exited; CPU time 6215.296829
11:51:57 (161618): called boinc_finish(0)

</stderr_txt>
]]>


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