Task 96726293

Name ebola_RdRp_v1_sample_01381300_r4_s-18.0_0
Workunit 67458684
Created 23 Oct 2025, 10:28:22 UTC
Sent 24 Oct 2025, 20:37:32 UTC
Report deadline 28 Oct 2025, 20:37:32 UTC
Received 25 Oct 2025, 7:41:14 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 80332
Run time 56 min 31 sec
CPU time 54 min 43 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.47 MB
Peak swap size 247.10 MB
Peak disk usage 20.33 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
23:37:37 (7834): wrapper (7.17.26016): starting
23:37:37 (7834): wrapper (7.17.26016): starting
23:37:37 (7834): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5938c8c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73ab46845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73ab4689eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73ab4684527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73ab468288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73ab468297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x73ab468a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x73ab468ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73ab468addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5938c8c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5938c8c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73ab46845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73ab468ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73ab468f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73ab4692975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5938c8c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5938c8c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73ab4682a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73ab4682a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5938c8c1aa3a]

Exiting...
23:53:25 (2828): wrapper (7.17.26016): starting
23:53:25 (2828): wrapper (7.17.26016): starting
23:53:25 (2828): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:09:26 (2812): wrapper (7.17.26016): starting
00:09:26 (2812): wrapper (7.17.26016): starting
00:09:26 (2812): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:11:23 (2773): wrapper (7.17.26016): starting
10:11:23 (2773): wrapper (7.17.26016): starting
10:11:23 (2773): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:28:53 (2756): wrapper (7.17.26016): starting
10:28:53 (2756): wrapper (7.17.26016): starting
10:28:53 (2756): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:31:07 (2921): wrapper (7.17.26016): starting
10:31:07 (2921): wrapper (7.17.26016): starting
10:31:07 (2921): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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