Task 96819380

Name	ebola_RdRp_v1_sidock_00016630_r3_s-24.0_0
Workunit	67548543
Created	26 Oct 2025, 20:01:25 UTC
Sent	28 Oct 2025, 16:37:31 UTC
Report deadline	1 Nov 2025, 16:37:31 UTC
Received	3 Nov 2025, 11:40:37 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	78817
Run time	13 hours 48 min 55 sec
CPU time	13 hours 14 min 11 sec
Validate state	Valid
Credit	502.00
Device peak FLOPS	6.18 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.18 MB
Peak swap size	247.31 MB
Peak disk usage	20.01 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:51:56 (78437): wrapper (7.17.26016): starting
11:51:56 (78437): wrapper (7.17.26016): starting
11:51:56 (78437): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x59d1c443ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x7ad931a458d0]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c) [0x7ad931aa49bc]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x7ad931a4579e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x2c) [0x7ad931a288cd]
/lib/x86_64-linux-gnu/libc.so.6(+0x29909) [0x7ad931a29909]
/lib/x86_64-linux-gnu/libc.so.6(+0xaef65) [0x7ad931aaef65]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x174) [0x7ad931ab4224]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x59d1c445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x59d1c447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x7ad931a458d0]
/lib/x86_64-linux-gnu/libc.so.6(+0xaafe2) [0x7ad931aaafe2]
/lib/x86_64-linux-gnu/libc.so.6(+0x9eae3) [0x7ad931a9eae3]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7ad931af4932]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7ad931b02657]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7ad931b336ba]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x59d1c4451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x59d1c443cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0xa27f1) [0x7ad931aa27f1]
/lib/x86_64-linux-gnu/libc.so.6(+0x133b5c) [0x7ad931b33b5c]

Exiting...
08:42:53 (5511): wrapper (7.17.26016): starting
08:42:54 (5511): wrapper (7.17.26016): starting
08:42:54 (5511): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x59c9ad83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x7772d0a458d0]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c) [0x7772d0aa49bc]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x7772d0a4579e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x2c) [0x7772d0a288cd]
/lib/x86_64-linux-gnu/libc.so.6(+0x29909) [0x7772d0a29909]
/lib/x86_64-linux-gnu/libc.so.6(+0xaef65) [0x7772d0aaef65]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x174) [0x7772d0ab4224]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x59c9ad85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x59c9ad87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x7772d0a458d0]
/lib/x86_64-linux-gnu/libc.so.6(+0xaafe2) [0x7772d0aaafe2]
/lib/x86_64-linux-gnu/libc.so.6(+0x9eae3) [0x7772d0a9eae3]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7772d0af4932]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7772d0b02657]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7772d0b336ba]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x59c9ad851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x59c9ad81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a578) [0x7772d0a2a578]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b) [0x7772d0a2a63b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x59c9ad81aa3a]

Exiting...
08:42:18 (5551): wrapper (7.17.26016): starting
08:42:18 (5551): wrapper (7.17.26016): starting
08:42:18 (5551): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x63eeed43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x756d5de458d0]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c) [0x756d5dea49bc]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x756d5de4579e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x2c) [0x756d5de288cd]
/lib/x86_64-linux-gnu/libc.so.6(+0x29909) [0x756d5de29909]
/lib/x86_64-linux-gnu/libc.so.6(+0xaef65) [0x756d5deaef65]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x174) [0x756d5deb4224]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x63eeed45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x63eeed47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x458d0) [0x756d5de458d0]
/lib/x86_64-linux-gnu/libc.so.6(+0xaafe2) [0x756d5deaafe2]
/lib/x86_64-linux-gnu/libc.so.6(+0x9eae3) [0x756d5de9eae3]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x756d5def4932]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x756d5df02657]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x756d5df336ba]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x63eeed451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x63eeed43cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0xa27f1) [0x756d5dea27f1]
/lib/x86_64-linux-gnu/libc.so.6(+0x133b5c) [0x756d5df33b5c]

Exiting...
08:52:57 (5732): wrapper (7.17.26016): starting
08:52:57 (5732): wrapper (7.17.26016): starting
08:52:57 (5732): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:40:23 (5732): cmdock exited; CPU time 7907.747697
12:40:23 (5732): called boinc_finish(0)

</stderr_txt>
]]>