Task 96903449

Name ebola_RdRp_v1_sidock_00020606_r1_s-24.0_0
Workunit 67624437
Created 29 Oct 2025, 9:35:24 UTC
Sent 29 Oct 2025, 13:01:18 UTC
Report deadline 2 Nov 2025, 13:01:18 UTC
Received 8 Nov 2025, 2:43:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80150
Run time 9 hours 12 min 47 sec
CPU time 8 hours 47 min 28 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.54 MB
Peak swap size 246.71 MB
Peak disk usage 19.52 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:01:23 (927128): wrapper (7.17.26016): starting
07:01:23 (927128): wrapper (7.17.26016): starting
07:01:23 (927128): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ff8a023ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x721f6bc45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x721f6bcadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ff8a025c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ff8a027b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x721f6bc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x721f6bcecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x721f6bcf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x721f6bd2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ff8a0251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ff8a021e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x721f6bc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x721f6bc2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ff8a021aa3a]

Exiting...
06:10:57 (241020): wrapper (7.17.26016): starting
06:10:57 (241020): wrapper (7.17.26016): starting
06:10:57 (241020): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:45:15 (44258): wrapper (7.17.26016): starting
14:45:15 (44258): wrapper (7.17.26016): starting
14:45:15 (44258): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:43:30 (44258): cmdock exited; CPU time 16176.968410
19:43:30 (44258): called boinc_finish(0)

</stderr_txt>
]]>


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