Task 96991392

Name ebola_RdRp_v1_sidock_00040479_r4_s-24.0_0
Workunit 67703932
Created 2 Nov 2025, 10:41:40 UTC
Sent 2 Nov 2025, 12:44:21 UTC
Report deadline 6 Nov 2025, 12:44:21 UTC
Received 3 Nov 2025, 2:43:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 71928
Run time 10 hours 41 min 29 sec
CPU time 9 hours 34 min 53 sec
Validate state Valid
Credit 659.15
Device peak FLOPS 7.39 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.33 MB
Peak swap size 247.69 MB
Peak disk usage 20.01 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:56:33 (367683): wrapper (7.17.26016): starting
07:56:33 (367683): wrapper (7.17.26016): starting
07:56:33 (367683): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x59b57b43ff8c]
/usr/lib/libc.so.6(+0x3e540) [0x7d4c0263e540]
/usr/lib/libc.so.6(__libc_free+0x17) [0x7d4c026a7f47]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x59b57b45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x59b57b47b8e4]
/usr/lib/libc.so.6(+0x3e540) [0x7d4c0263e540]
/usr/lib/libc.so.6(+0x9f042) [0x7d4c0269f042]
/usr/lib/libc.so.6(+0x931ac) [0x7d4c026931ac]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7d4c026e3c12]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7d4c026efc97]
/usr/lib/libc.so.6(usleep+0x4a) [0x7d4c0271a57a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x59b57b451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x59b57b41e784]
/usr/lib/libc.so.6(+0x27675) [0x7d4c02627675]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7d4c02627729]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x59b57b41aa3a]

Exiting...
18:13:31 (8976): wrapper (7.17.26016): starting
18:13:31 (8976): wrapper (7.17.26016): starting
18:13:31 (8976): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:43:31 (8976): cmdock exited; CPU time 1619.899790
18:43:31 (8976): called boinc_finish(0)

</stderr_txt>
]]>


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