Task 96993332

Name ebola_RdRp_v1_sidock_00040942_r3_s-24.0_0
Workunit 67705783
Created 2 Nov 2025, 10:43:13 UTC
Sent 2 Nov 2025, 14:34:10 UTC
Report deadline 6 Nov 2025, 14:34:10 UTC
Received 3 Nov 2025, 8:32:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 71928
Run time 10 hours 30 min 40 sec
CPU time 9 hours 26 min 48 sec
Validate state Valid
Credit 604.88
Device peak FLOPS 7.39 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.14 MB
Peak swap size 246.56 MB
Peak disk usage 20.12 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:49:16 (395632): wrapper (7.17.26016): starting
13:49:16 (395632): wrapper (7.17.26016): starting
13:49:16 (395632): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x646fed83ff8c]
/usr/lib/libc.so.6(+0x3e540) [0x71ca57a3e540]
/usr/lib/libc.so.6(__libc_free+0x17) [0x71ca57aa7f47]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x646fed85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x646fed87b8e4]
/usr/lib/libc.so.6(+0x3e540) [0x71ca57a3e540]
/usr/lib/libc.so.6(+0x9f042) [0x71ca57a9f042]
/usr/lib/libc.so.6(+0x931ac) [0x71ca57a931ac]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x71ca57ae3c12]
/usr/lib/libc.so.6(nanosleep+0x17) [0x71ca57aefc97]
/usr/lib/libc.so.6(sleep+0x3e) [0x71ca57b022de]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a) [0x646fed851a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x646fed81e784]
/usr/lib/libc.so.6(+0x27675) [0x71ca57a27675]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x71ca57a27729]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x646fed81aa3a]

Exiting...
18:13:31 (8979): wrapper (7.17.26016): starting
18:13:31 (8979): wrapper (7.17.26016): starting
18:13:31 (8979): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:04:31 (10298): wrapper (7.17.26016): starting
20:04:31 (10298): wrapper (7.17.26016): starting
20:04:31 (10298): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:32:26 (10298): cmdock exited; CPU time 15528.915829
00:32:26 (10298): called boinc_finish(0)

</stderr_txt>
]]>


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