Task 97000718

Name ebola_RdRp_v1_sidock_00042794_r3_s-24.0_0
Workunit 67713191
Created 2 Nov 2025, 10:49:20 UTC
Sent 2 Nov 2025, 21:49:28 UTC
Report deadline 6 Nov 2025, 21:49:28 UTC
Received 3 Nov 2025, 12:04:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 71928
Run time 9 hours 1 min 5 sec
CPU time 8 hours 48 min 36 sec
Validate state Valid
Credit 532.61
Device peak FLOPS 7.39 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.37 MB
Peak swap size 247.72 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:43:34 (138411): wrapper (7.17.26016): starting
18:43:34 (138411): wrapper (7.17.26016): starting
18:43:34 (138411): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x629728c3ff8c]
/usr/lib/libc.so.6(+0x3e540) [0x74a73983e540]
/usr/lib/libc.so.6(__libc_free+0x17) [0x74a7398a7f47]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x629728c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x629728c7b8e4]
/usr/lib/libc.so.6(+0x3e540) [0x74a73983e540]
/usr/lib/libc.so.6(+0x9f042) [0x74a73989f042]
/usr/lib/libc.so.6(+0x931ac) [0x74a7398931ac]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x74a7398e3c12]
/usr/lib/libc.so.6(nanosleep+0x17) [0x74a7398efc97]
/usr/lib/libc.so.6(usleep+0x4a) [0x74a73991a57a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x629728c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x629728c1e784]
/usr/lib/libc.so.6(+0x27675) [0x74a739827675]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x74a739827729]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x629728c1aa3a]

Exiting...
20:07:08 (13727): wrapper (7.17.26016): starting
20:07:08 (13727): wrapper (7.17.26016): starting
20:07:08 (13727): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:04:04 (13727): cmdock exited; CPU time 27655.984849
04:04:04 (13727): called boinc_finish(0)

</stderr_txt>
]]>


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