Task 97035761

Name ebola_RdRp_v1_sidock_00051542_r3_s-24.0_0
Workunit 67748183
Created 2 Nov 2025, 11:18:20 UTC
Sent 4 Nov 2025, 12:26:55 UTC
Report deadline 8 Nov 2025, 12:26:55 UTC
Received 5 Nov 2025, 1:45:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76470
Run time 5 hours 16 min 48 sec
CPU time 5 hours 16 min 48 sec
Validate state Valid
Credit 556.55
Device peak FLOPS 10.34 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.22 MB
Peak swap size 246.50 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
13:26:11 (11760): wrapper (7.17.26016): starting
13:26:11 (11760): wrapper (7.17.26016): starting
13:26:11 (11760): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55648a83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7faad5101050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7faad514feec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7faad5100fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7faad50eb472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7faad514442f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7faad515986a]
/lib/x86_64-linux-gnu/libc.so.6(+0x968ac)[0x7faad515b8ac]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7faad515df4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8ec)[0x55648a87b8ec]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7faad5101050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7faad5194545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7faad5198e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7faad51c4245]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55648a851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd)[0x55648a83cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0x891f5)[0x7faad514e1f5]
/lib/x86_64-linux-gnu/libc.so.6(+0x10989c)[0x7faad51ce89c]

Exiting...
17:03:33 (731): wrapper (7.17.26016): starting
17:03:34 (731): wrapper (7.17.26016): starting
17:03:34 (731): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:45:22 (731): cmdock exited; CPU time 10683.120418
20:45:22 (731): called boinc_finish(0)

</stderr_txt>
]]>


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