Task 97036645

Name ebola_RdRp_v1_sidock_00051768_r4_s-24.0_0
Workunit 67749088
Created 2 Nov 2025, 11:19:05 UTC
Sent 4 Nov 2025, 13:34:50 UTC
Report deadline 8 Nov 2025, 13:34:50 UTC
Received 5 Nov 2025, 3:08:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76470
Run time 5 hours 1 min 3 sec
CPU time 5 hours 1 min 3 sec
Validate state Valid
Credit 510.40
Device peak FLOPS 10.34 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.02 MB
Peak swap size 245.12 MB
Peak disk usage 19.96 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
15:09:37 (11826): wrapper (7.17.26016): starting
15:09:37 (11826): wrapper (7.17.26016): starting
15:09:37 (11826): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5573b043ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f058179e050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7f05817eceec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7f058179dfb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f0581788472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7f05817e142f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7f05817f686a]
/lib/x86_64-linux-gnu/libc.so.6(+0x968ac)[0x7f05817f88ac]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7f05817faf4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8ec)[0x5573b047b8ec]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f058179e050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f0581831545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f0581835e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f0581861245]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5573b0451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd)[0x5573b043cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0x891f5)[0x7f05817eb1f5]
/lib/x86_64-linux-gnu/libc.so.6(+0x10989c)[0x7f058186b89c]

Exiting...
17:03:33 (734): wrapper (7.17.26016): starting
17:03:34 (734): wrapper (7.17.26016): starting
17:03:34 (734): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:07:49 (734): cmdock exited; CPU time 14644.717588
22:07:49 (734): called boinc_finish(0)

</stderr_txt>
]]>


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