Task 97042971

Name ebola_RdRp_v1_sidock_00053351_r3_s-24.0_0
Workunit 67755419
Created 2 Nov 2025, 11:24:17 UTC
Sent 4 Nov 2025, 19:56:28 UTC
Report deadline 8 Nov 2025, 19:56:28 UTC
Received 6 Nov 2025, 19:14:15 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 80676
Run time 26 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.06 MB
Peak swap size 41.34 MB
Peak disk usage 19.87 MB

Stderr output

<core_client_version>7.24.6</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
11:56:31 (3702141): wrapper (7.17.26016): starting
11:56:32 (3702141): wrapper (7.17.26016): starting
11:56:32 (3702141): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/38/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56000b03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f6c9adf3520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f6c9ae479fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f6c9adf3476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f6c9add97f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7f6c9ae3a677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f6c9ae51cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f6c9ae53a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f6c9ae56453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7cd9d)[0x56000b07cd9d]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c31e)[0x56000b05c31e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56000b07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f6c9adf3520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f6c9ae967f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f6c9ae9b677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f6c9aeccf9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56000b051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56000b01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f6c9addad90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f6c9addae40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56000b01aa3a]

Exiting...
11:04:25 (228377): wrapper (7.17.26016): starting
11:04:27 (228377): wrapper (7.17.26016): starting
11:04:28 (228377): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/38/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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