Task 97056021

Name ebola_RdRp_v1_sidock_00056601_r1_s-24.0_0
Workunit 67768417
Created 2 Nov 2025, 11:35:09 UTC
Sent 5 Nov 2025, 8:10:33 UTC
Report deadline 9 Nov 2025, 8:10:33 UTC
Received 6 Nov 2025, 12:21:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 23175
Run time 12 hours 28 min 49 sec
CPU time 11 hours 35 min 16 sec
Validate state Valid
Credit 398.34
Device peak FLOPS 5.45 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.01 MB
Peak swap size 247.74 MB
Peak disk usage 19.92 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:25:41 (182965): wrapper (7.17.26016): starting
03:25:41 (182965): wrapper (7.17.26016): starting
03:25:41 (182965): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ba99603ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7db2c1a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7db2c1a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7db2c1a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7db2c1a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7db2c1a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7db2c1aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7db2c1aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7db2c1aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ba99605c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ba99607b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7db2c1a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7db2c1aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7db2c1af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7db2c1b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ba996051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ba99601e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7db2c1a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7db2c1a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ba99601aa3a]

Exiting...
02:32:04 (198247): wrapper (7.17.26016): starting
02:32:04 (198247): wrapper (7.17.26016): starting
02:32:04 (198247): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:21:18 (198247): cmdock exited; CPU time 12237.549522
06:21:18 (198247): called boinc_finish(0)

</stderr_txt>
]]>


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