Task 97071265

Name ebola_RdRp_v1_sidock_00029801_r2_s-24.0_2
Workunit 67661218
Created 3 Nov 2025, 13:38:13 UTC
Sent 5 Nov 2025, 23:27:54 UTC
Report deadline 9 Nov 2025, 23:27:54 UTC
Received 9 Nov 2025, 2:56:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80464
Run time 11 hours 59 min 12 sec
CPU time 11 hours 37 min 10 sec
Validate state Valid
Credit 483.42
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.78 MB
Peak swap size 247.19 MB
Peak disk usage 19.95 MB

Stderr output

<core_client_version>7.24.6</core_client_version>
<![CDATA[
<stderr_txt>
08:58:41 (228051): wrapper (7.17.26016): starting
08:58:42 (228051): wrapper (7.17.26016): starting
08:58:42 (228051): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/77/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562b88e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f4210b65520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7f4210bc83fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c33e)[0x562b88e5c33e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562b88e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f4210b65520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f4210c087f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f4210c0d677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f4210c3ef9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562b88e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562b88e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f4210b4cd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f4210b4ce40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562b88e1aa3a]

Exiting...
13:54:44 (10545): wrapper (7.17.26016): starting
13:54:44 (10545): wrapper (7.17.26016): starting
13:54:44 (10545): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/77/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:55:44 (10545): cmdock exited; CPU time 17393.208780
18:55:44 (10545): called boinc_finish(0)

</stderr_txt>
]]>


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