Task 97081595

Name	ebola_RdRp_v1_sidock_00061235_r2_s-24.0_0
Workunit	67786954
Created	6 Nov 2025, 2:34:14 UTC
Sent	6 Nov 2025, 8:53:03 UTC
Report deadline	10 Nov 2025, 8:53:03 UTC
Received	8 Nov 2025, 8:59:19 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	65808
Run time	8 hours 16 min 44 sec
CPU time	8 hours 16 min 36 sec
Validate state	Valid
Credit	493.67
Device peak FLOPS	3.41 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.23 MB
Peak swap size	247.28 MB
Peak disk usage	19.97 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:52:35 (6691): wrapper (7.17.26016): starting
08:52:35 (6691): wrapper (7.17.26016): starting
08:52:35 (6691): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5eceb763ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7dca6f842520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7dca6f8969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7dca6f842476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7dca6f8287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7dca6f889677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7dca6f8a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7dca6f8a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7dca6f8a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5eceb765c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5eceb767b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7dca6f842520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7dca6f8e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7dca6f8ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7dca6f91bf9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5eceb7651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5eceb761e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7dca6f829d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7dca6f829e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5eceb761aa3a]

Exiting...
15:38:05 (2488): wrapper (7.17.26016): starting
15:38:05 (2488): wrapper (7.17.26016): starting
15:38:05 (2488): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:54:41 (3140): wrapper (7.17.26016): starting
08:54:41 (3140): wrapper (7.17.26016): starting
08:54:41 (3140): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:59:06 (3140): cmdock exited; CPU time 3862.523754
09:59:06 (3140): called boinc_finish(0)

</stderr_txt>
]]>