Task 97152564

Name ebola_RdRp_v1_sidock_00078961_r1_s-24.0_0
Workunit 67857857
Created 6 Nov 2025, 3:35:38 UTC
Sent 9 Nov 2025, 7:10:51 UTC
Report deadline 13 Nov 2025, 7:10:51 UTC
Received 12 Nov 2025, 3:00:19 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 3 hours 48 min 11 sec
CPU time 3 hours 48 min 3 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.06 MB
Peak swap size 247.68 MB
Peak disk usage 20.00 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
02:24:35 (22475): wrapper (7.17.26016): starting
02:24:35 (22475): wrapper (7.17.26016): starting
02:24:35 (22475): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x63467023ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70ef2f845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70ef2f89eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70ef2f84527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70ef2f8288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70ef2f8297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70ef2f8a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70ef2f8ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70ef2f8addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x63467025c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x63467027b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70ef2f845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70ef2f8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70ef2f8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70ef2f92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x634670251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x63467021e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70ef2f82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70ef2f82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x63467021aa3a]

Exiting...
19:05:56 (2649): wrapper (7.17.26016): starting
19:05:56 (2649): wrapper (7.17.26016): starting
19:05:56 (2649): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (18111): wrapper (7.17.26016): starting
21:00:02 (18111): wrapper (7.17.26016): starting
21:00:02 (18111): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:07 (18111): cmdock exited; CPU time 4.057810
21:00:07 (18111): called boinc_finish(0)

</stderr_txt>
]]>


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