Task 97161202

Name ebola_RdRp_v1_sidock_00050074_r3_s-24.0_1
Workunit 67742311
Created 8 Nov 2025, 7:41:06 UTC
Sent 9 Nov 2025, 13:57:36 UTC
Report deadline 13 Nov 2025, 13:57:36 UTC
Received 10 Nov 2025, 20:29:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 13 hours 44 min 34 sec
CPU time 13 hours 42 min 50 sec
Validate state Valid
Credit 520.09
Device peak FLOPS 5.51 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.77 MB
Peak swap size 248.03 MB
Peak disk usage 20.06 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:43:08 (7752): wrapper (7.17.26016): starting
17:43:08 (7752): wrapper (7.17.26016): starting
17:43:08 (7752): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56374c43ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f6754032420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f6753ec66f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56374c45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56374c47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f6753e6f090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f6753f0923f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f6753f0eec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f6753f41a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56374c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56374c41e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f6753e50083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56374c41aa3a]

Exiting...
11:52:50 (2656): wrapper (7.17.26016): starting
11:52:50 (2656): wrapper (7.17.26016): starting
11:52:50 (2656): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:28:58 (2656): cmdock exited; CPU time 31242.993438
23:28:58 (2656): called boinc_finish(0)

</stderr_txt>
]]>


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