Task 97172654

Name ebola_RdRp_v1_sidock_00081959_r2_s-24.0_0
Workunit 67869850
Created 9 Nov 2025, 16:07:00 UTC
Sent 9 Nov 2025, 22:51:45 UTC
Report deadline 13 Nov 2025, 22:51:45 UTC
Received 16 Nov 2025, 17:28:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 61482
Run time 10 hours 5 min 19 sec
CPU time 10 hours 5 min 8 sec
Validate state Valid
Credit 551.84
Device peak FLOPS 3.18 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.15 MB
Peak swap size 248.04 MB
Peak disk usage 20.07 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:13:19 (5732): wrapper (7.17.26016): starting
21:13:19 (5732): wrapper (7.17.26016): starting
21:13:19 (5732): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x565bf903ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71c397845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71c3978add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x565bf905c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x565bf907b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71c397845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71c3978ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71c3978f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71c39792975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x565bf9051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x565bf901e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71c39782a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71c39782a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x565bf901aa3a]

Exiting...
12:30:26 (2825): wrapper (7.17.26016): starting
12:30:26 (2825): wrapper (7.17.26016): starting
12:30:26 (2825): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:27:56 (2825): cmdock exited; CPU time 21442.786898
18:27:56 (2825): called boinc_finish(0)

</stderr_txt>
]]>


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