Task 97182878

Name ebola_RdRp_v1_sidock_00084512_r1_s-24.0_0
Workunit 67880061
Created 9 Nov 2025, 16:16:01 UTC
Sent 10 Nov 2025, 6:27:51 UTC
Report deadline 14 Nov 2025, 6:27:51 UTC
Received 11 Nov 2025, 22:22:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80631
Run time 17 hours 35 min 13 sec
CPU time 17 hours 21 min 49 sec
Validate state Valid
Credit 550.81
Device peak FLOPS 4.16 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.87 MB
Peak swap size 247.75 MB
Peak disk usage 20.06 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:02:50 (1692866): wrapper (7.17.26016): starting
12:02:50 (1692866): wrapper (7.17.26016): starting
12:02:50 (1692866): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (19 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ae344c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78489c045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78489c09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78489c04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x78489c0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x78489c0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x78489c0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x78489c0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x78489c0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ae344c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ae344c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78489c045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78489c0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78489c0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78489c12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ae344c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd)[0x5ae344c3cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0x9caa4)[0x78489c09caa4]
/lib/x86_64-linux-gnu/libc.so.6(+0x129c6c)[0x78489c129c6c]

Exiting...
20:55:43 (2231): wrapper (7.17.26016): starting
20:55:44 (2231): wrapper (7.17.26016): starting
20:55:44 (2231): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:22:29 (2231): cmdock exited; CPU time 4257.082186
23:22:29 (2231): called boinc_finish(0)

</stderr_txt>
]]>


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