Task 97229627

Name ebola_RdRp_v1_sidock_00096191_r1_s-24.0_0
Workunit 67926777
Created 9 Nov 2025, 16:55:26 UTC
Sent 11 Nov 2025, 20:51:23 UTC
Report deadline 15 Nov 2025, 20:51:23 UTC
Received 16 Nov 2025, 17:50:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 61482
Run time 9 hours 43 min 22 sec
CPU time 9 hours 43 min 10 sec
Validate state Valid
Credit 530.19
Device peak FLOPS 3.18 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.51 MB
Peak swap size 246.68 MB
Peak disk usage 20.21 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:07 (12704): wrapper (7.17.26016): starting
21:58:07 (12704): wrapper (7.17.26016): starting
21:58:07 (12704): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6354c503ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71b3f1e45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71b3f1eadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6354c505c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6354c507b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71b3f1e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71b3f1eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71b3f1ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71b3f1f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6354c5051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6354c501e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71b3f1e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71b3f1e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6354c501aa3a]

Exiting...
12:30:26 (2826): wrapper (7.17.26016): starting
12:30:26 (2826): wrapper (7.17.26016): starting
12:30:26 (2826): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:50:19 (2826): cmdock exited; CPU time 22785.889416
18:50:19 (2826): called boinc_finish(0)

</stderr_txt>
]]>


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