Task 97998349

Name ebola_RdRp_v1_sidock_00268665_r1_s-24.0_0
Workunit 68616673
Created 16 Dec 2025, 16:32:15 UTC
Sent 18 Dec 2025, 15:30:23 UTC
Report deadline 22 Dec 2025, 15:30:23 UTC
Received 19 Dec 2025, 3:03:44 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 3 hours 35 min 17 sec
CPU time 3 hours 34 min 57 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.29 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.48 MB
Peak swap size 247.55 MB
Peak disk usage 20.08 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:12:21 (18023): wrapper (7.17.26016): starting
10:12:21 (18023): wrapper (7.17.26016): starting
10:12:21 (18023): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x630d0183ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77ea50045330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x77ea500add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x630d0185c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x630d0187b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77ea50045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77ea500ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77ea500f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77ea5012975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x630d01851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x630d0181e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77ea5002a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77ea5002a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x630d0181aa3a]

Exiting...
16:20:20 (2437): wrapper (7.17.26016): starting
16:20:20 (2437): wrapper (7.17.26016): starting
16:20:20 (2437): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:03:23 (2375): wrapper (7.17.26016): starting
21:03:23 (2375): wrapper (7.17.26016): starting
21:03:23 (2375): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:03:27 (2375): cmdock exited; CPU time 3.279957
21:03:27 (2375): called boinc_finish(0)

</stderr_txt>
]]>


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