Task 98036443

Name	ebola_RdRp_v1_sidock_00278140_r2_s-24.0_0
Workunit	68654574
Created	16 Dec 2025, 17:07:09 UTC
Sent	20 Dec 2025, 7:31:24 UTC
Report deadline	24 Dec 2025, 7:31:24 UTC
Received	22 Dec 2025, 5:47:52 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54582
Run time	11 hours 21 min 46 sec
CPU time	11 hours 21 min 16 sec
Validate state	Valid
Credit	501.67
Device peak FLOPS	8.41 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.67 MB
Peak swap size	247.17 MB
Peak disk usage	20.20 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:43:25 (350063): wrapper (7.17.26016): starting
06:43:26 (350063): wrapper (7.17.26016): starting
06:43:26 (350063): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x61fcbc03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x791e46c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x791e46c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x791e46c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x791e46c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x791e46c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x791e46ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x791e46cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x791e46caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x61fcbc05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x61fcbc07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x791e46c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x791e46cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x791e46cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x791e46d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x61fcbc051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x61fcbc01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x791e46c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x791e46c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x61fcbc01aa3a]

Exiting...
21:00:02 (475089): wrapper (7.17.26016): starting
21:00:02 (475089): wrapper (7.17.26016): starting
21:00:02 (475089): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64455c23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75ae76e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75ae76e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75ae76e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75ae76e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75ae76e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75ae76ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75ae76eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75ae76eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64455c25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64455c27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75ae76e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75ae76eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75ae76ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75ae76f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64455c251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64455c21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75ae76e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75ae76e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64455c21aa3a]

Exiting...
21:00:02 (698272): wrapper (7.17.26016): starting
21:00:02 (698272): wrapper (7.17.26016): starting
21:00:02 (698272): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:47:41 (698272): cmdock exited; CPU time 9974.367905
23:47:41 (698272): called boinc_finish(0)

</stderr_txt>
]]>