Task 98038983

Name ebola_RdRp_v1_sidock_00278787_r1_s-24.0_0
Workunit 68657161
Created 16 Dec 2025, 17:09:30 UTC
Sent 20 Dec 2025, 10:10:06 UTC
Report deadline 24 Dec 2025, 10:10:06 UTC
Received 22 Dec 2025, 10:49:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54582
Run time 11 hours 50 min 52 sec
CPU time 11 hours 50 min 18 sec
Validate state Valid
Credit 554.05
Device peak FLOPS 8.41 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.39 MB
Peak swap size 247.80 MB
Peak disk usage 20.22 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:32:20 (479821): wrapper (7.17.26016): starting
21:32:20 (479821): wrapper (7.17.26016): starting
21:32:20 (479821): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d97ff03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c68ed645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c68ed69eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c68ed64527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c68ed6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c68ed6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c68ed6a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c68ed6ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c68ed6addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d97ff05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d97ff07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c68ed645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c68ed6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c68ed6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c68ed72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d97ff051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d97ff01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c68ed62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c68ed62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d97ff01aa3a]

Exiting...
21:06:46 (699270): wrapper (7.17.26016): starting
21:06:46 (699270): wrapper (7.17.26016): starting
21:06:46 (699270): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:49:37 (699270): cmdock exited; CPU time 21139.526530
04:49:37 (699270): called boinc_finish(0)

</stderr_txt>
]]>


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