Task 98108358

Name ebola_RdRp_v1_sidock_00293999_r2_s-24.0_0
Workunit 68718010
Created 20 Dec 2025, 20:28:40 UTC
Sent 24 Dec 2025, 5:02:57 UTC
Report deadline 28 Dec 2025, 5:02:57 UTC
Received 24 Dec 2025, 18:43:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 7 hours 28 min 38 sec
CPU time 7 hours 28 min 31 sec
Validate state Valid
Credit 494.23
Device peak FLOPS 10.20 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.54 MB
Peak swap size 245.56 MB
Peak disk usage 20.27 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:28:12 (24633): wrapper (7.17.26016): starting
23:28:12 (24633): wrapper (7.17.26016): starting
23:28:12 (24633): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56926283ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73c1cec45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x73c1cecadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56926285c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56926287b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73c1cec45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73c1cececadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73c1cecf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73c1ced2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x569262851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56926281e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73c1cec2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73c1cec2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56926281aa3a]

Exiting...
10:12:55 (111061): wrapper (7.17.26016): starting
10:12:55 (111061): wrapper (7.17.26016): starting
10:12:55 (111061): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:42:47 (111061): cmdock exited; CPU time 8982.513029
12:42:47 (111061): called boinc_finish(0)

</stderr_txt>
]]>


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