Task 98108405

Name ebola_RdRp_v1_sidock_00294011_r3_s-24.0_0
Workunit 68718059
Created 20 Dec 2025, 20:28:42 UTC
Sent 24 Dec 2025, 5:06:29 UTC
Report deadline 28 Dec 2025, 5:06:29 UTC
Received 24 Dec 2025, 17:12:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 7 hours 28 min 16 sec
CPU time 7 hours 28 min 7 sec
Validate state Valid
Credit 517.19
Device peak FLOPS 10.20 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.54 MB
Peak swap size 245.61 MB
Peak disk usage 20.24 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:29:01 (24734): wrapper (7.17.26016): starting
23:29:01 (24734): wrapper (7.17.26016): starting
23:29:01 (24734): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x566e0de3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78ebc2a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78ebc2a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78ebc2a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x78ebc2a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x78ebc2a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x78ebc2aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x78ebc2aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x78ebc2aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x566e0de5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x566e0de7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78ebc2a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78ebc2aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78ebc2af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78ebc2b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x566e0de51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x566e0de1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78ebc2a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78ebc2a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x566e0de1aa3a]

Exiting...
10:29:02 (113055): wrapper (7.17.26016): starting
10:29:02 (113055): wrapper (7.17.26016): starting
10:29:02 (113055): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:12:26 (113055): cmdock exited; CPU time 2595.717938
11:12:26 (113055): called boinc_finish(0)

</stderr_txt>
]]>


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