Task 98109507

Name ebola_RdRp_v1_sidock_00294286_r1_s-24.0_0
Workunit 68719157
Created 20 Dec 2025, 20:29:40 UTC
Sent 24 Dec 2025, 6:42:45 UTC
Report deadline 28 Dec 2025, 6:42:45 UTC
Received 24 Dec 2025, 19:31:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60274
Run time 8 hours 5 min 45 sec
CPU time 8 hours 5 min 36 sec
Validate state Valid
Credit 491.06
Device peak FLOPS 9.71 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.10 MB
Peak swap size 246.91 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:09:10 (34561): wrapper (7.17.26016): starting
01:09:10 (34561): wrapper (7.17.26016): starting
01:09:10 (34561): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/26/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x653ff623ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c815b845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c815b89eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c815b84527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c815b8288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c815b8297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c815b8a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c815b8ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c815b8addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x653ff625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x653ff627b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c815b845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c815b8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c815b8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c815b92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x653ff6251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x653ff621e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c815b82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c815b82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x653ff621aa3a]

Exiting...
09:45:03 (99019): wrapper (7.17.26016): starting
09:45:03 (99019): wrapper (7.17.26016): starting
09:45:03 (99019): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/26/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:31:30 (99019): cmdock exited; CPU time 12305.437658
13:31:30 (99019): called boinc_finish(0)

</stderr_txt>
]]>


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