Task 98127355

Name ebola_RdRp_v1_sidock_00298754_r2_s-24.0_0
Workunit 68737030
Created 20 Dec 2025, 20:45:29 UTC
Sent 25 Dec 2025, 10:22:00 UTC
Report deadline 29 Dec 2025, 10:22:00 UTC
Received 26 Dec 2025, 11:24:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 10 hours 31 min 12 sec
CPU time 10 hours 31 min 3 sec
Validate state Valid
Credit 505.67
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.79 MB
Peak swap size 246.00 MB
Peak disk usage 20.34 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:02:49 (1309320): wrapper (7.17.26016): starting
05:02:49 (1309320): wrapper (7.17.26016): starting
05:02:49 (1309320): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x61d3f7e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72e2bb045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72e2bb09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72e2bb04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72e2bb0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72e2bb0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72e2bb0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72e2bb0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72e2bb0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x61d3f7e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x61d3f7e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72e2bb045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72e2bb0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72e2bb0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72e2bb12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x61d3f7e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x61d3f7e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72e2bb02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72e2bb02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x61d3f7e1aa3a]

Exiting...
11:26:23 (2526): wrapper (7.17.26016): starting
11:26:23 (2526): wrapper (7.17.26016): starting
11:26:23 (2526): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (79279): wrapper (7.17.26016): starting
21:00:02 (79279): wrapper (7.17.26016): starting
21:00:02 (79279): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:24:26 (79279): cmdock exited; CPU time 23977.762361
05:24:26 (79279): called boinc_finish(0)

</stderr_txt>
]]>


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