Task 98132847

Name ebola_RdRp_v1_sidock_00261721_r2_s-24.0_1
Workunit 68588898
Created 21 Dec 2025, 1:31:33 UTC
Sent 25 Dec 2025, 19:13:47 UTC
Report deadline 29 Dec 2025, 19:13:47 UTC
Received 26 Dec 2025, 17:27:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 10 hours 18 min 36 sec
CPU time 10 hours 18 min 29 sec
Validate state Valid
Credit 491.12
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.52 MB
Peak swap size 247.42 MB
Peak disk usage 20.13 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:22:36 (20366): wrapper (7.17.26016): starting
13:22:36 (20366): wrapper (7.17.26016): starting
13:22:36 (20366): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x641cd063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7edd0e045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7edd0e09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7edd0e04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7edd0e0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7edd0e0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7edd0e0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7edd0e0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7edd0e0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x641cd065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x641cd067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7edd0e045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7edd0e0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7edd0e0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7edd0e12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x641cd0651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x641cd061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7edd0e02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7edd0e02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x641cd061aa3a]

Exiting...
21:58:14 (87344): wrapper (7.17.26016): starting
21:58:14 (87344): wrapper (7.17.26016): starting
21:58:14 (87344): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:50:17 (2509): wrapper (7.17.26016): starting
10:50:17 (2509): wrapper (7.17.26016): starting
10:50:17 (2509): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:27:26 (2509): cmdock exited; CPU time 2227.624844
11:27:26 (2509): called boinc_finish(0)

</stderr_txt>
]]>


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