Task 98135224

Name ebola_RdRp_v1_sidock_00269756_r2_s-24.0_1
Workunit 68621038
Created 21 Dec 2025, 23:47:28 UTC
Sent 25 Dec 2025, 22:07:27 UTC
Report deadline 29 Dec 2025, 22:07:27 UTC
Received 26 Dec 2025, 8:28:38 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 81232
Run time 1 hours 48 min 53 sec
CPU time 1 hours 26 min 33 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 8.99 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.14 MB
Peak swap size 246.02 MB
Peak disk usage 19.96 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:21:26 (222869): wrapper (7.17.26016): starting
23:21:26 (222869): wrapper (7.17.26016): starting
23:21:26 (222869): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:12:10 (1848): wrapper (7.17.26016): starting
01:12:10 (1848): wrapper (7.17.26016): starting
01:12:10 (1848): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55658863ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa35c860df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7fa35c8b595c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7fa35c860cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7fa35c8494ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7fa35c84a291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7fa35c8bf465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7fa35c8c43dc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55658865c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55658867b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa35c860df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fa35c8bb9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fa35c8b0668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fa35c8fcf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fa35c908393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fa35c931373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x556588651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55658861e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fa35c84aca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fa35c84ad65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55658861aa3a]

Exiting...
09:28:07 (1824): wrapper (7.17.26016): starting
09:28:07 (1824): wrapper (7.17.26016): starting
09:28:07 (1824): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:28:12 (1824): cmdock exited; CPU time 4.723822
09:28:12 (1824): called boinc_finish(0)

</stderr_txt>
]]>


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