Task 98140866

Name ebola_RdRp_v1_sidock_00294615_r4_s-24.0_1
Workunit 68720476
Created 24 Dec 2025, 15:17:38 UTC
Sent 26 Dec 2025, 5:06:23 UTC
Report deadline 30 Dec 2025, 5:06:23 UTC
Received 26 Dec 2025, 21:08:17 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 9 hours 27 min 10 sec
CPU time 9 hours 27 min 4 sec
Validate state Valid
Credit 436.87
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.09 MB
Peak swap size 245.25 MB
Peak disk usage 20.29 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:30:56 (101093): wrapper (7.17.26016): starting
23:30:57 (101093): wrapper (7.17.26016): starting
23:30:57 (101093): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x593fc3e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70d9d3845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70d9d389eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70d9d384527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70d9d38288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70d9d38297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70d9d38a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70d9d38ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70d9d38addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x593fc3e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x593fc3e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70d9d3845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70d9d38ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70d9d38f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70d9d392975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x593fc3e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x593fc3e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70d9d382a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70d9d382a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x593fc3e1aa3a]

Exiting...
10:50:17 (2512): wrapper (7.17.26016): starting
10:50:17 (2512): wrapper (7.17.26016): starting
10:50:17 (2512): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/25/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:08:06 (2512): cmdock exited; CPU time 13658.035526
15:08:06 (2512): called boinc_finish(0)

</stderr_txt>
]]>


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