Task 98141339

Name ebola_RdRp_v1_sidock_00271531_r2_s-24.0_2
Workunit 68628138
Created 24 Dec 2025, 18:01:56 UTC
Sent 26 Dec 2025, 5:47:10 UTC
Report deadline 30 Dec 2025, 5:47:10 UTC
Received 27 Dec 2025, 9:19:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54582
Run time 11 hours 30 min 29 sec
CPU time 11 hours 30 min 15 sec
Validate state Valid
Credit 508.81
Device peak FLOPS 8.41 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.09 MB
Peak swap size 247.48 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:28:45 (1608273): wrapper (7.17.26016): starting
00:28:45 (1608273): wrapper (7.17.26016): starting
00:28:45 (1608273): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a17ca3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72b1c2245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72b1c229eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72b1c224527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72b1c22288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72b1c22297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72b1c22a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72b1c22ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72b1c22addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a17ca5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a17ca7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72b1c2245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72b1c22ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72b1c22f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72b1c232975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55a17ca51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a17ca1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72b1c222a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72b1c222a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a17ca1aa3a]

Exiting...
21:00:02 (1794126): wrapper (7.17.26016): starting
21:00:03 (1794126): wrapper (7.17.26016): starting
21:00:03 (1794126): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:19:43 (1794126): cmdock exited; CPU time 22408.228768
03:19:43 (1794126): called boinc_finish(0)

</stderr_txt>
]]>


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