Task 98143772

Name ebola_RdRp_v1_sidock_00284338_r4_s-24.0_1
Workunit 68679368
Created 25 Dec 2025, 15:17:30 UTC
Sent 26 Dec 2025, 7:55:45 UTC
Report deadline 30 Dec 2025, 7:55:45 UTC
Received 27 Dec 2025, 10:54:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 50 min 10 sec
CPU time 8 hours 49 min 54 sec
Validate state Valid
Credit 567.50
Device peak FLOPS 9.29 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.02 MB
Peak swap size 247.04 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:49:36 (119510): wrapper (7.17.26016): starting
02:49:36 (119510): wrapper (7.17.26016): starting
02:49:36 (119510): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64ceff03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x756e8c045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x756e8c09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x756e8c04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x756e8c0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x756e8c0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x756e8c0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x756e8c0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x756e8c0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64ceff05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64ceff07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x756e8c045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x756e8c0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x756e8c0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x756e8c12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64ceff051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64ceff01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x756e8c02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x756e8c02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64ceff01aa3a]

Exiting...
11:19:26 (7098): wrapper (7.17.26016): starting
11:19:26 (7098): wrapper (7.17.26016): starting
11:19:26 (7098): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:25:30 (80727): wrapper (7.17.26016): starting
21:25:30 (80727): wrapper (7.17.26016): starting
21:25:30 (80727): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:54:33 (80727): cmdock exited; CPU time 19182.518864
04:54:33 (80727): called boinc_finish(0)

</stderr_txt>
]]>


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